Photosynthesis

Photosynthesis
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I. Capturing the Energy of Life

  1. All organisms require energy
  2. Some organisms (autotrophs) obtain energy directly from the sun and store it in organic compounds (glucose) during a process called photosynthesis

6CO2 + 6H2O + energy –>  6O2 + C6H12O6

II. Energy for Life Processes

  1. Energy is the ability to do work
  2. Work for a cell includes growth & repair, active transport across cell membranes, reproduction, synthesis of cellular products, etc.
  3. Work is the ability to change or move matter against other forces (W = F x D)
  4. Autotrophs or producers convert sunlight, CO2, and H2O into glucose (their food)
  5. Plants, algae, and blue-green bacteria, some prokaryotes, are producers or autotrophs
  6. Only 10% of the Earth’s 40 million species are autotrophs
  7. Other autotrophs use inorganic compounds instead of sunlight to make food; process known as chemosynthesis
  8. Producers make food for themselves and heterotrophs or consumers that cannot make food for themselves
  9. Heterotrophs include animals, fungi, & some bacteria, & protists

III.      Biochemical Pathways

  1. Photosynthesis and cellular respiration are biochemical pathways
  2. Biochemical pathways are a series of reactions where the product of one reaction is the reactant of the next
  3. Only autotrophs are capable of photosynthesis
  4. Both autotrophs & heterotrophs perform cellular respiration to release energy to do work
  5. In photosynthesis, CO2(carbon dioxide) and H2O (water) are combined to form C6H12O6 (glucose) & O2 (oxygen)
    6CO2 + 6H2O + energy –>  6O2 + C6H12O6
  6. In cellular respiration, O2 (oxygen) is used to burn C6H12O6 (glucose) & release CO2(carbon dioxide), H2O (water), and energy 
  7. Usable energy released in cellular respiration is called adenosine triphosphate or ATP

 

IV. Light Absorption in Chloroplasts

  1. Chloroplasts in plant & algal cells absorb light energy from the sun during the light dependent reactions
  2. Photosynthetic cells may have thousands of chloroplasts
  3. Chloroplasts are double membrane organelles with the an inner membrane folded into disc-shaped sacs called thylakoids
  4. Thylakoids, containing chlorophyll and other accessory pigments, are in stacks called granum (grana, plural)
  5. Grana are connected to each other & surrounded by a gel-like material called stroma
  6. Light-capturing pigments in the grana are organized into photosystems

 V. Pigments

  1. Light travels as waves & packets called photons
  2. Wavelength of light is the distance between 2 consecutive peaks or troughs

  1. Sunlight or white light is made of different wavelengths or colors carrying different amounts of energy
  2. A prism separates white light into 7 colors (red, orange, yellow, green, blue, indigo, & violet) ROY G. BIV
  3. These colors are called the visible spectrum

  1. When light strikes an object, it is absorbed, transmitted, or reflected
  2. When all colors are absorbed, the object appears black
  3. When all colors are reflected, the object appears white
  4. If only one color is reflected (green), the object appears that color (e.g. Chlorophyll)
VI. Pigments in the Chloroplasts

 

chlorophyll is found only in the chloroplasts
  1. Thylakoids contain a variety of pigments ( green red, orange, yellow…)
  2. Chlorophyll  (C55H70MgN4O6) is the most common pigment in plants & algae
  3. Chlorophyll a & chlorophyll b are the 2 most common types of chlorophyll in autotrophs
  4. Chlorophyll absorbs only red, blue, & violet light
  5. Chlorophyll b absorbs colors or light energy NOT absorbed by chlorophyll a
  6. The light energy absorbed by chlorophyll b is transferred to chlorophyll a in the light reactions

structural formula of chlorophyll

  1. Carotenoids are accessory pigments in the thylakoids & include yellow, orange, & red

 

VII. Overview of Photosynthesis        6CO2 + 6H2O C6H12O6 + 6O2

  1. Photosynthesis is not a simple one step reaction but a biochemical pathway involving many steps
  2. This complex reaction can be broken down into  two reaction systems — light dependent & light independent or dark reactions
  • Light Reaction:         H2O O2 + ATP + NADPH2
    • Water is split, giving off oxygen.
    • This system depends on sunlight for activation energy.
    • Light is absorbed by chlorophyll a which “excites” the electrons in the chlorophyll molecule.
    • Electrons are passed through a series of carriers and adenosine triphosphate or ATP (energy) is produced.
    • Takes place in the thylakoids.
  • Dark Reaction:         ATP + NADPH2 + CO2 C6H12O6
    • Carbon dioxide is split, providing carbon to make sugars.
    • The ultimate product is glucose.
    • While this system depends on the products from the light reactions, it does not directly require light energy.
    • Includes the Calvin Cycle.
    • Takes place in the stroma.

VIII. Calvin Cycle

  1. Carbon atoms from CO2 are bonded or “fixed” into organic compounds during a process called carbon fixation
  2. The energy stored in ATP and NADPH during the Light Reactions is used in the Calvin cycle
  3. The Calvin cycle has 3 main steps occurring within the stroma of the Chloroplast

     STEP 1

  • CO2 diffuses into the stroma from surrounding cytosol
  • An enzyme combines a CO2 molecule with a five-carbon carbohydrate called RuBP
  • The six-carbon molecule produced then splits immediately into a pair of three-carbon molecules known as PGA

      STEP 2

  • Each PGA molecule receives a phosphate group from a molecule of ATP
  • This compound then receives a proton from NADPH and releases a phosphate group producing PGAL
  • These reactions produce ADP, NADP+, and phosphate which are used again in the Light Reactions.

   STEP 3

  • Most PGAL is converted back to RuBP to keep the Calvin cycle going
  • Some PGAL leaves the Calvin Cycle and is used to make other organic compounds including amino acids, lipids, and carbohydrates
  • PGAL serves as the starting material for the synthesis of glucose and fructose
  • Glucose and fructose make the disaccharide sucrose, which travels in solution to other parts of the plant (e.g., fruit, roots)

movements within plants

  • Glucose is also the monomer used in the synthesis of the polysaccharides starch and cellulose

  1. Each turn of the Calvin cycle fixes One CO2 molecule so it takes six turns to make one molecule of glucose

IX. Photosystems & Electron Transport Chain

  1. Only 1 in 250 chlorophyll molecules (chlorophyll a) actually converts light energy into usable energy
  2. These molecules are called reaction-center chlorophyll
  3. The other molecules (chlorophyll b, c, & d and carotenoids) absorb light energy and deliver it to the reaction-center molecule
  4. These chlorophyll molecules are known as antenna pigments
  5. A unit of several hundred antenna pigment molecules plus a reaction center is called a photosynthetic unit or photosystem
  6. There are 2 types of photosystems — Photosystem I & Photosystem II
  7. Light is absorbed by the antenna pigments of photosystems II and I
  8. The absorbed energy is transferred to the reaction center pigment, P680 in photosystem II, P700 in photosystem I
  9. P680 in Photosystem II loses an electron and becomes positively charged so it can now split water & release electrons  (2H2O   4H+   +   4e-   +  O2)
  10. Electrons from water are transferred to the cytochrome complex of Photosystem I
  11. These excited electrons activate P700 in photosystem I which helps reduce NADP+ to NADPH
  12. NADPH is used in the Calvin cycle
  13. Electrons from Photosystem II replace the electrons that leave chlorophyll molecules in Photosystem I

X. Chemiosmosis (KEM-ee-ahz-MOH-suhs)

  1. Synthesis or making of ATP (energy)
  2. Depends on the concentration gradient of protons ( H+) across the thylakoid membrane
  3. Protons (H+) are produced from the splitting of water in Photosystem II
  4. Concentration of Protons is HIGHER in the thylakoid than in the stroma
  5. Enzyme, ATP synthetase in the thylakoid membrane, makes ATP by adding a phosphate group to ADP

XI. Alternate Pathways

  1. The Calvin cycle is the most common pathway used by autotrophs called C3 Plants
  2. Plants in hot, dry climates use alternate pathways to fix carbon & then transfer it to the Calvin cycle
  3. Stomata are small openings on the underside of leaves for gas exchange (O2 & CO2)
  4. Guard cells on each side of the stoma help open & close the stomata
  5. Plants also lose H2O through stoma so they are closed during the hottest part of the day

  1. C4 plants  fix CO2 into 4-Carbon Compounds during the hottest part of the day when  their stomata are partially closed
  2. C4 plants include corn, sugar cane and crabgrass
  3. CAM plants include cactus & pineapples
  4. CAM plants open their stomata at night and close during the day so CO2 is fixed at night
  5. During the day, the CO2 is released from these compounds and enters the Calvin Cycle

XII. Factors Determining the Rate of Photosynthesis

  1. Light intensity – As light intensity increases, the rate of photosynthesis initially increases and then levels off to a plateau
  2. Temperature – Only the dark, not the light reactions are temperature dependent because of the enzymes they use (25 oC to 37oC)
  3. Length of day
  4. Increasing the amount of carbon dioxide available improves the photosynthesis rate
  5. Level of air pollution

 

 

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Photosynthesis Study Guide BI

 

 

Photosynthesis Study Guide

 

Give several examples of life processes that require energy.
What is the major light absorbing pigment in plants?
What two things are formed by plants when carbon dioxide & water are combined using sunlight as the energy?
Clusters of light absorbing pigments located in the thylakoid membranes of a chloroplast are called what?
Do all organisms require energy?
Are all wavelengths of sunlight absorbed by a plant to make sugar? Explain. 
Only ___________, not heterotrophs, carry on photosynthesis.
When the products of one chemical reaction are used as the reactants for the next reaction, the series of reactions is known as a ___________________ pathway.
Plants cells use light to make what two energy carrying molecules?
What sugar is the final product of photosynthesis?
Electrons are transported from one molecule to another by __________ atoms.
Can the dark reactions of photosynthesis occur during the daytime or only in the dark?
C4 and CAM plants use less water to make sugar than __________ plants.
How do heterotrophs obtain their energy?
What is the original source of energy for all living things on earth?
Stacks of thylakoids called grana are suspended in the fluid inside chloroplasts called __________.
Light travels to plants as tiny packets of radiant energy called _________.
Chlorophyll of plants looks green because green light is ______________ to your eye.
What happens to the electrons of chlorophyll when they are stuck by sunlight?
What gas is put back into our atmosphere by photosynthesis?
Complex carbohydrates are made during what cycle during photosynthesis?
What pigments give flower petals their colors?
Electrons raised to a higher energy level when struck by light enter what chain?
What important energy carrier molecule in photosynthesis picks up hydrogen atoms?
Oxygen made during photosynthesis comes from the splitting of what molecule?
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Photosynthesis & Respiration Study Guide

Photosynthesis & Cellular Respiration Study Guide

 

1. Name 3 life processes that use energy.

2. What are heterotrophs?

3. What is the ultimate energy for all life on earth?

4. What is photosynthesis?

5. Where are grana found in a chloroplast?

6. What is a biochemical pathway?

 

7. Solar energy is converted into what type of energy in photosynthesis?

8. What is the function of chlorophyll?

 

9. Name 3 things that can happen to light that strikes an object.

 

10. Explain why chlorophyll looks green.

 

11. What happens to a chlorophyll molecule that absorbs light energy?

12. What happens to the energized electrons of chlorophyll?

 

13. What is the source of oxygen produced during photosynthesis?

14. What two products of the light reactions provide energy for the Calvin cycle?

15. Can the Calvin cycle take place if light is present? if light is absent?

16. What atmospheric gas is a byproduct of photosynthesis?

17. When during photosynthesis is glucose made?

18. What are the 2 energy sources for the Calvin Cycle?

19. Where does the carbon in organic molecules come from?

20. Heterotrophs depend indirectly on _________ fro energy.

21. When food is broken down, energy is TEMPORARILY stored in what molecule?

22. All organisms use ________ as their energy molecule.

23. Oxygen produced during ___________ is used during _________________.

24. What is the effect of lactic acid on muscles?

25. When do muscles form lactic acid?

26. Glucose is split during what process?

27. Two molecules of what form from the splitting of glucose?

28. How much ATP is made from the initial splitting of glucose in the cytoplasm?

29. What is the anaerobic respiration of carbohydrates called?

30. Name the 2 main stages in cellular respiration.

31. ___________ respiration only occurs in the presence of oxygen.

32. NADPH is formed during what process?

33. NADH is formed during what process?

34. The Krebs cycle occurs in what process?

35. the Calvin cycle occurs in what process?

36. Water is the end product of what process?

37. At the end of the ETC, what gas is added to form water?

38. In cellular respiration, the most ATP is generated during the ___________.

39. What 2 energy carriers enter the ETC in cellular respiration?

40. Be able to define autotrophs & heterotrophs and to give examples of each.

Photosynthesis Notes Bi

  PHOTOSYNTHESIS
 CAPTURING THE ENERGY IN LIGHT

Organisms use energy to carry out the functions of life
Autotrophs obtain this energy directly from sunlight and store it within organic compounds
This energy transfer process  is called photosynthesis

ENERGY FOR LIFE PROCESSES

Energy is the ability to do work
Cellular work includes growth, repair, active transport, synthesis, & reproduction
Food made by autotrophs is the source of energy for all other organisms

5. Most AUTOTROPHS or PRODUCERS use PHOTOSYNTHESIS, to Convert the Energy in SUNLIGHT, CARBON DIOXIDE, AND WATER  into Chemical Energy OR FOOD.  (GLUCOSE)

6. THE FOODS MADE BY AUTOTROPHS ARE stored in various Organic Compounds, primarily CARBOHYDRATES, including a SIX-CARBON SUGAR called GLUCOSE.

7.  Plants, algae, and some prokaryotes (Bacteria) are all types of Autotrophs.

8. Only 10 percent of the Earth’s 40 million species are Autotrophs.

9. Without Autotrophs, all other living things would DIE.  Without PRODUCERS you cannot have CONSUMERS.

10. Autotrophs not only make Food for their own use, but STORE a great deal of Food for use by other organisms (CONSUMERS).

11. Most Autotrophs use ENERGY from the SUN to make their food, but there are other organisms deep in the ocean that obtain Energy from INORGANIC COMPOUNDS. (CHEMOSYNTHESIS)

12. Organisms that CANNOT Make their own food are called HETEROTROPHS OR CONSUMERS.

13. Heterotrophs include animals, fungi, and many unicellular organisms, they stay alive by EATING AUTOTROPHS or other HETEROTROPHS.

14. Because Heterotrophs must consume other organisms to get Energy, they are called CONSUMERS.

15. Only part of the energy from the Sun is Used by Autotrophs to make Food, and only part of that Energy can be passed on to other Consumers. A Great Deal of the Energy is LOST as HEAT.

16. Enough Energy is passed from Autotroph to Heterotroph to give the Heterotroph the Energy it needs.

17. Photosynthesis involves a COMPLEX SERIES of Chemical Reactions, in which the PRODUCT of One Reaction is Consumed in the Next Reaction.

18. A Series of Reactions linked in this way is referred to as a BIOCHEMICAL PATHWAY. (Figure 6-1)

19. Autotrophs use biochemical pathways of photosynthesis to manufacture organic compounds from Carbon Dioxide, CO2, and Water.  During this conversion, molecular OXYGEN, O2, is Released.

20. Some of the energy stored in organic Compounds is Released by Cells in another set of Biochemical Pathways, Known as CELLULAR RESPIRATION.  (Chapter 7)

21. Both Autotrophs and Heterotrophs Perform Cellular Respiration.

22. During Cellular Respiration in Most Organisms, Organic Compounds are Combined with O2 to Produce ADENOSINE TRIPHOSPHATE or ATP, Yielding CO2 and Water as Waste Products.

23. The PRODUCTS of Photosynthesis, ORGANIC COMPOUNDS and O2, are the REACTANTS used in CELLULAR RESPIRATION.

24. The WASTE PRODUCTS of CELLULAR RESPIRATION, CO2 and WATER, are the REACTANTS used in PHOTOSYNTHESIS.

LIGHT ABSORPTION IN CHLOROPLASTS

1. In Plants, the INITIAL REACTIONS in Photosynthesis are known as the LIGHT REACTIONS.

2. They begin with the ABSORPTION of Light in the organelle found in Plant Cells and algae called CHLOROPLASTS.

3. A Photosynthetic Cell contains anywhere from ONE to Several Thousands Chloroplasts.

4. A Chloroplasts is surrounded by TWO MEMBRANES.  The INNER Membrane is Folded into many Layers. (Figure 6-2)

5. A Chloroplasts Inner Membrane layers fuse along the edges to Form THYLAKOIDS.

6. THYLAKOIDS ARE DISK-SHAPED STRUCTURES THAT CONTAIN PHOTOSYNTHETIC PIGMENTS.

7. Each Thylakoid is a closed Compartment surrounded by a Central Space.  THE THYLAKOIDS ARE SURROUNDED BY A GEL-LIKE MATRIX (SOLUTION) CALLED THE STROMA. (Figure 6-2)

8.THE NEATLY FOLDED THYLAKOIDS THAT RESEMBLE STACKS OF PANCAKES ARE CALLED GRANA. The Thylakoids are Interconnected and are Layered on top of one another to form the STACKS of Grana.

9. Each Chloroplasts may contain hundreds or more Grana.

10. Hundreds of Chlorophyll Molecules and other Pigments in the Grana are organized into PHOTOSYSTEMS.

11. PHOTOSYSTEMS ARE LIGHT COLLECTING UNITS OF CHLOROPLASTS.

LIGHT AND PIGMENTS

1. LIGHT is made of Particles called PHOTONS that move in WAVES.

2. The Distance between peaks of the waves is called WAVELENGTH.

3.  Different Wavelengths of Light Carry different amounts of Energy.

4.  Sunlight is visible as White, it is actually a variety of Different Colors.

5. You can separate White Light into its component colors by passing the light through a PRISM.

6. The resulting array of colors, ranging from red at one end to violet at the other is called the VISIBLE SPECTRUM.

7. Each Color of Light has different Wavelengths, and a Different Energy.

8.  When light strikes an object, its component colors can be Reflected, Transmitted, or Absorbed by an object.

9. An Object that ABSORBS ALL COLORS appears BLACK.

10.  A PIGMENT IS A MOLECULE THAT ABSORBS CERTAIN WAVELENGTHS OF LIGHT AND REFLECTS OR TRANSMITS OTHERS.

11. Objects or Organisms vary in Color because of their specific combination of Pigments.

12. WAVELENGTHS that are REFLECTED by Pigments are SEEN as the object’s COLOR.

CHLOROPLASTS PIGMENTS

1. Located in the Membrane of the Thylakoids are a variety of Pigments.

2. CHLOROPHYLLS ARE THE MOST COMMON AND IMPORTANT PIGMENTS IN PLANTS AND ALGAE.

3. The TWO most common Types of Chlorophylls are designated Chlorophyll a and Chlorophyll b.

4. A Slight difference in molecular structure between Chlorophyll a and Chlorophyll b causes the Two molecules to Absorb different colors of light.

5. Chlorophyll’s ABSORB VIOLET, BLUE AND RED LIGHT.  These are the Wavelengths of Light that Photosynthesis Occurs. (Figure 6-4)

6 Chlorophyll a ABSORBS LESS BLUE Light but MORE RED Light than Chlorophyll b Absorbs.

7. ONLY Chlorophyll a is DIRECTLY INVOLVED in the LIGHT REACTIONS of Photosynthesis.  Chlorophyll b ASSISTS Chlorophyll a in Capturing Light Energy and is called an ACCESSORY PIGMENT.

8. By Absorbing colors Chlorophyll a CANNOT Absorb, the Accessory Pigments enable Plants to Capture MORE of the Energy in Light

9. Chlorophylls REFLECT and TRANSMIT GREEN LIGHT, causing Plants to appear GREEN.

10. Another group of Accessory Pigments found in the Thylakoid Membranes, called the CAROTENOIDS,  INCLUDES YELLOW, RED, AND ORANGE PIGMENTS THAT COLOR CARROTS, BANANAS, SQUASH, FLOWERS AND AUTUMN LEAVES.

11. The Carotenoids in Green Leaves are usually masked by Chlorophylls until Autumn when Chlorophylls break down.

OVERVIEW OF PHOTOSYNTHESIS

“THE BIG PICTURE”

1. Photosynthesis is the process that provides energy for almost all Life.

2. During Photosynthesis, Autotrophs use the Sun’s Energy to make Carbohydrate Molecules from Water and Carbon Dioxide, Releasing Oxygen as a Byproduct.

3.  The Process of PHOTOSYNTHESIS CAN BE SUMMARIZED BY THE FOLLOWING EQUATION:

6CO2       +              6H2O          +      LIGHT    C6H12O2          +              6O2
CARBON               WATER               ENERGY                 6-CARBON                 OXYGEN
DIOXIDE                                                                                 SUGAR                         GAS
4. In this equation the Six-Carbon Sugar GLUCOSE and Oxygen are the Products.

5. The Energy Stored in Glucose and other Carbohydrates can be used later to produce ATP during Cellular Respiration.

6. The Process of Photosynthesis does NOT Happen all at Once; rather it occurs in  THREE STAGES:

STAGE 1 – CALLED THE LIGHT DEPENDENT REACTIONS. Energy is Capture from Sunlight.  Water is Split into Hydrogen Ions, Electrons, and Oxygen (O2).  The O2 Diffuses out of the Chloroplasts (Byproduct).

STAGE 2 – The Light Energy is Converted to Chemical Energy, which is Temporarily Stored in ATP and NADPH.

STAGE 3 – CALLED THE CALVIN CYCLE. The Chemical Energy Stored in ATP and NADPH powers the formation of Organic Compounds (Sugars), Using Carbon Dioxide, CO2.

7. Photosynthesis occurs in the Chloroplasts of Plant Cells and Algae and in the Cell Membranes of certain Bacteria.
ELECTRON TRANSPORT – LIGHT REACTIONS

1. The Chlorophylls and Carotenoids are grouped in Cluster of a Few Hundred Pigment Molecules in the Thylakoid Membranes.

2. Each Cluster of Pigment Molecules is referred to as a PHOTOSYSTEM.  There are Two Types of Photosystems known as PHOTOSYSTEM I AND PHOTOSYSTEM II.

3. Photosystem I and Photosystem II are similar in terms of pigments, but they have Different Roles in the Light reactions.

4. The Light Reactions BEGIN when Accessory Pigment molecules of BOTH Photosystems Absorb Light.

5. By Absorbing Light, those Molecules Acquire some of the Energy that was carried by the Light Waves.

6. In each Photosystem, the Acquired Energy is Passed to other Pigment Molecules until it reaches a Specific Pair of CHLOROPHYLL a Molecules.

7. The Events occur from this point on can be Divided into 5 STEPS. (Refer to Figure 6-5)

STEP 1 – Light Energy Forces Electrons to enter a Higher Energy Level in the TWO Chlorophyll a Molecules of Photosystem II.  These Energized Electrons are said to be “EXCITED”.

STEP 2 – The Excited Electrons have enough Energy to Leave Chlorophyll a Molecules.  Because they have lost Electrons, the Chlorophyll a Molecules have undergone an OXIDATION REACTION (lost of Electrons).  Each Oxidation Reaction must be accompanied by a REDUCTION REACTION (some substance must Accept the Electrons).  The Substance is a Molecule in the Thylakoid Membrane Known as a PRIMARY ELECTRON ACCEPTOR.

STEP 3 – The Primary Electron Acceptor then Donates (gives) the Electrons to the First of a Series of Molecules located in the Thylakoid.  This Series of Molecules is called an ELECTRON TRANSPORT CHAIN, because it Transfers Electrons from One Molecule to the Next in Series.  As the Electrons are pass from molecule to molecule, they LOSE most of the Energy they acquired when they were Excited.  The Energy they LOSE is Harnessed to Move Protons into the Thylakoid.

STEP 4 –  At the same time Light is Absorbed by Photosystem II, Light is also Absorbed by Photosystem I.  Electrons move from a Pair of Chlorophyll a Molecules in Photosystem I to another Primary electron Acceptor.  The electrons that are LOST by these Chlorophyll a Molecules are REPLACED by the Electrons that have passed through the electron Transport Chain from Photosystem II.

STEP 5 – The Primary Electron Acceptor of Photosystem I donates Electrons to different Electron Transport Chain.  This Chain brings Electrons to the side of the Thylakoid Membrane that FACES THE STROMA.  There Electrons COMBINE with a PROTON and NADP+.  NADP+ is an Organic Molecule that ACCEPTS Electrons during REDOX Reactions.  This reaction causes NADP+ to be Reduced to NADPH.

RESTORING PHOTOSYSTEM II – PHOTOLYSIS

1. The Electrons from Chlorophyll Molecules on Photosystem II REPLACE the Electrons that Leave Chlorophyll Molecules in Photosystem I.

2. If the electrons were NOT Replaced, both Electron Transport Chains would STOP, and Photosynthesis would NOT Occur.

3. The Replacement Electrons are provided by WATER MOLECULES.  Enzymes (RuBP carboxylase or Rubisco) inside the Thylakoid SPLITS Water Molecules into PROTONS, ELECTRONS, AND OXYGEN.

2H2O   4H+   +   4e-   +  O2

4. For Every TWO Molecules of Water that are Split, FOUR Electrons become available to Replace those lost by Chlorophyll Molecules in Photosystem II.

5. The PROTONS that are produced are left inside the Thylakoid, while Oxygen Diffuses out of the Chloroplasts and can Leave The Plant.

6. OXYGEN can be regarded as a Byproduct of the Light Reaction – it is NOT Needed for Photosynthesis.

7. The Oxygen that results from Photosynthesis is ESSENTIAL for Cellular Respiration in most organisms, including Plants.

8. The photochemical splitting of water in the light-dependent reactions of photosynthesis, catalyzed by a specific enzyme is called Photolysis.

9. The enzyme that speeds up this reaction, called RuBP carboxylase (Rubisco), about 20-50% of the protein content in chloroplast, and it may be one of the most abundant proteins in the biosphere.

CHEMIOSMOSIS (KEM-ee-ahz-MOH-suhs)

1. An important part of the Light Reaction is the SYNTHESIS of ATP through a process called CHEMIOSMOSIS.

2. Chemiosmosis Relies on a CONCENTRATED GRADIENT of Protons Across the Thylakoid Membrane.

3. Protons are Produced from the Breakdown of Water Molecules, Other Protons are Pumped into the Thylakoid from the Stroma during Photosystem II.

4. Both these mechanisms act to build up a Concentration Gradient of Protons.  The Concentration of Protons is HIGHER in the Thylakoid than in the Stroma.

5. The Concentration Gradient Represents Potential Energy.  The energy is Harnessed by a Protein called ATP SYNTHASE, which is located in the Thylakoid Membrane.

6. ATP Synthase makes ATP by ADDING a PHOSPHATE GROUP to ADENOSINE DIPHOSPHATE, OR ADP.  By Catalyzing the Synthesis of ATP from ADP, ATP Synthase functions as an Enzyme.

7. ATP Synthase Converts Potential Energy of the Protons Concentrated Gradient into Chemical Energy of ATP.

8. Together, NADPH and ATP Provide Energy for the Second Set of Reactions in Photosynthesis.

SECTION 6-2  THE CALVIN CYCLE

The Second Set of reactions in photosynthesis involves a biochemical pathway known as the CALVIN CYCLE.  This pathway produces Organic Compounds, using the energy stored in ATP and NADPH during the Light Reactions.  The Calvin Cycle is named after Melvin Calvin (1911-1997), the American scientist who worked out the details of the pathway.

OBJECTIVES:  Summarized the main events of the Calvin Cycle.  Describe what happens to the compounds made in the Calvin Cycle.  Distinguish between C3, C4, and CAM Plants.  Explain how environmental factors influence photosynthesis.

CARBON FIXATION BY THE CALVIN SYSTEM

1. In the Calvin Cycle, Carbon Atoms From CO2 are Bonded, or “FIXED”, into Organic Compounds.

2. The incorporation of CO2 into Organic Compounds is referred to as CARBON FIXATION.

3. The Calvin Cycle has THREE Major Steps, Which OCCUR within the STROMA of the Chloroplasts.  (Figure 6-8)

STEP 1  –  CO2 Diffuses into the Stroma from the surrounding Cytosol.  An Enzyme combines a CO2 Molecule with a FIVE CARBON CARBOHYDRATE CALLED RuBP (ribulose bisphosphate).  The PRODUCT is a Six-Carbon Molecule that Splits into a Pair of Three-Carbon Molecules known as PGA (3-phosphoglycerate).

STEP 2 – PGA is Converted into another Three-Carbon Molecule, PGAL, in a Two Part Process:

A. Each PGA Molecule Receives a Phosphate Group from a molecule of ATP – forming ADP

B. The resulting compound then Receives a Proton from NADPH (forming NADP+) and Releases a Phosphate Group, Producing PGAL.

In addition to PGAL, these Reactions produce ADP, NADP+, and Phosphate.  These Three Products can be used again in the Light Reactions to Synthesis additional Molecules of ATP and NADPH.

STEP 3 – Most of the PGAL is Converted back into RuBP in a series of reaction to Return to Step 1 and allow the Calvin Cycle to Continue.  However, SOME PGAL Molecules LEAVE the Calvin Cycle and can be used by the Plant Cell to Make other Organic Compounds.

THE BALANCE SHEET FOR PHOTOSYNTHESIS

1. Each Turn of the Calvin Cycle Fixes One CO2 Molecule.  Since PGAL is a Three-Carbon Compound, it takes Three Turns of the Cycle to Produce each Molecule of PGAL.

2. For Each Turn of the Cycle TWO ATP, and TWO NADPH Molecules are used in Step 2, and ONE ATP Molecule used in Step 3.

3. THREE Turns of the Calvin Cycle uses NINE Molecules of ATP and SIX Molecules of NADPH.

4. The Simplest OVERALL Equation for Photosynthesis, including both Light Reactions and the Calvin Cycle, can be written as:

6CO2  +  6H20  +  LIGHT ENERGY   C6H12O6  +  6O2

ALTERNATIVE PATHWAYS

1. The Calvin Cycle is the MOST Common Pathway for Carbon Fixation.  Plant Species that fix Carbon EXCLUSIVELY through the Calvin Cycle are known as C3 PLANTS.

2. Other Plant Species Fix Carbon through alternative Pathways and then Release it to enter the Calvin Cycle.

3. These alternative pathways are generally found in plants that evolved in HOT, DRY Climates.

4. Under such conditions, plants can rapidly lose water to the air.  Most of the water loss from plants occurs through Small Pores on the Undersurface of the Leaves called STOMATA. Plants obtain carbon dioxide for photosynthesis from the air. Plants must balance their neeed to open their Stomata to receive carbon dioxide and release oxygen with their need to close their Stomata to prevent water loss. A stoma is bordered by TWO Kidney Shaped GUARD CELLS, Guard Cells are modified cells that Regulate Gas and Water Exchange.

5. Stomata are the major passageway through which CO2 Enters and O2 Leaves a Plant.

6. When a plant’s Stomata are partly CLOSED, the level of CO2 FALLS (Used in Calvin Cycle), and the Level of O2 RISES (as Light reactions Split Water Molecules).

7. A LOW CO2 and HIGH O2 Level inhibits Carbon Fixing by the Calvin Cycle.  Plants with alternative pathways of Carbon fixing have Evolved ways to deal with this problem.

8. C4 PLANTS – Allows certain plants to fix CO2 into FOUR-Carbon Compounds.  During the Hottest part of the day, C4 plants have their Stomata Partially Closed.  C4 plants include corn, sugar cane and crabgrass.  Such plants Lose only about Half as much Water as C3 plants when producing the same amount of Carbohydrate.

9. THE CAM PATHWAY – Cactus, pineapples have different adaptations to Hot, Dry Climates.  They Fix Carbon through a pathway called CAM.  Plants that use the CAM Pathway Open their Stomata at NIGHT and Close during the DAY, the opposite of what other plants do.  At NIGHT, CAM Plants take in CO2 and fix into Organic Compounds.  During the DAY, CO2 is released from these Compounds and enters the Calvin Cycle.  Because CAM Plants have their Stomata open at night, they grow very Slowly, But they lose LESS Water than C3 or C4 Plants.

RATE OF PHOTOSYNTHESIS

1. The Rate at which a plant can carry out photosynthesis is affected by the PLANT’S ENVIRONMENT.

2. THREE THINGS IN THE PLANT’S ENVIRONMENT AFFECT THE RATE OF PHOTOSYNTHESIS:  LIGHT INTENSITY,  CO2 LEVELS, AND TEMPERATURE. (Figure 6-10)

3. LIGHT INTENSITY – One of the most Important, As Light Intensity INCREASES, the Rate of Photosynthesis Initially INCREASES and then Levels Off to a Plateau.

4. CO2 LEVELS AROUND THE PLANT – Increasing the level of CO2 Stimulates Photosynthesis until the rate reaches a Plateau.

5. TEMPERATURE – RAISING the Temperature ACCELERATES the Chemical Reactions involved in Photosynthesis.  The rate of Photosynthesis Increase as Temperature Increases.  The rate of Photosynthesis generally PEAKS at a certain Temperature, and Photosynthesis begins to Decrease when the Temperature is further Increased. (Figure 6-10b)

 

Pedigree Lab

Constructing a Pedigree

Introduction

A pedigree is a special chart or family tree that uses a particular set of standardized symbols. Pedigrees are used to show the history of inherited traits through a family. In a pedigree, males are represented by squares and females by circles . An individual who exhibits the trait in question, for example, someone who suffers from hemophilia, is represented by a filled symbol or . A horizontal line between two symbols represents a mating . The offspring are connected to each other by a horizontal line above the symbols and to the parents by vertical lines. Roman numerals (I, II, III, etc.) symbolize generations. Arabic numerals (1,2,3, etc.) symbolize birth order within each generation. In this way, any individual within the pedigree can be identified by the combination of two numbers (i.e., individual II3).

Objective

Inherited traits can be traced through a family’s history by constructing a pedigree chart.

Materials

Large sheet of paper or poster board
Markers
Ruler
Protractor

Procedure
Part 1

1.      Examine Figure 1 that traces the ability to roll your tongue through three generations in a family. Remember: Blackened circles show the trait and circles are females and squares are male.

2.    Determine which parents and which offspring would be able to roll their tongue.  

FIGURE 1

 

Part 2

3.    Read the Passage 1 about the Smith family and their inherited trait of dimples.

4.    After reading the passage, construct a pedigree showing all family members in each generation that does and does NOT have dimples.

5.    Once the pedigree is constructed, write the correct genotype by each person in the family.

 

Passage 1

Grandfather and Grandmother Smith smiled a lot and showed off their dimples each time. They had a son named John, who had dimples, and daughter named Julie, who did not. Julie died at an early age, but her brother John Smith met and married Mary Jones because she had the most beautiful dimples when she smiled. They had 5 children, 2 boys and 3 girls. Only one of their sons, Tom, had dimples, but both girls, Judy and Kay, had dimpled smiles. Their sister June lacked dimples. After college, Tom met and married Jane Kennedy who also had dimples. They had 3 children, all girls, who shared their parent’s dimpled smile. Tom’s sister Kay married a lawyer named James who seldom smiled and didn’t have dimples. Their only son Matthew was like his mother when he smiled. Judy never married. Tom’s sister, June, married a doctor and had 5 children. Three of the children were boys, Jay, Fred, and Mike. Mike and Fred had dimples like dad, but Jay’s smile was like his mom’s lacking dimples. One sister, Susan, had dimples, but the other, Katherine, didn’t.

 

Questions

1.      What type of information does a pedigree contain?

2.    How do you show the presence of a trait in a pedigree?

3.    How do you denote males & females in a pedigree?

4.    From your pedigree, is the presence of dimples a dominant or recessive trait?

5.     How could examining a family pedigree be helpful to a couple wanting to have children?