Protein Synthesis Puzzle

 

Protein Synthesis
Across 2. a series of three mRNA nucleotides that codes for an amino acid 3. coded for by DNA and made of amino acids 7. process of assembling amino acids into polypeptides in the ribosomes 9. RNA that copies DNA in the nucleus 10. use to translate mRNA transcripts into proteins 11. UGA, UAA, and UAG codons 12. RNA that carries amino acids to be linked together to make proteins 15. site of transcription Down 1. both DNA and RNA are these types of compounds 2. where ribosomes are found 4. series of three bases on tRNA that code for an amino acid 5. base on RNA that replaces thymine 6. holes in the nuclear membrane where mRNA leaves to move to the ribosome 8. methionine codon (AUG) 13. RNA that makes up ribosomes along with proteins 14. site of protein synthesis

 

Pterosaur Reconstruction Bi

 

Pterosaur Reconstruction

 

Introduction:

A common sight during the Cretaceous period was the soaring through the air of a large fur-covered creature called the pterosaur. Pterosaur means flying lizard. Wings of some  pterosaurs were longer than the wings of a small plane. This creature lived on cliffs at the edge of lagoons and would sail from its nest to catch prey.  The bones of one pterosaur, Scaphognathus crassirostris, were discovered in 1826 by the German scientist, August Goldfuss.  The fossilized bones were located in a limestone quarry and were unbroken.  Scaphognathus crassirostris was approximately the size of a large bat with a broad jaw and short tail.

Objective:

Students will reconstruct the skeleton of S. crassirostris and draw conclusions about its method of movement, feeding habits, and other adaptations.

Materials:

Scissors, tape, construction paper, glue, metric ruler, pencil

                     
Fossil Cast of S. crassirostris                                    

 

Procedure:

  1. Use the drawings of S. crassirostris bones to cut out and reassemble a model of the flying reptile.
  2. Glue the model bones to a sheet of construction paper being sure to center the model and keep all bones on the paper.
  3. Use the metric ruler to measure the complete wingspan of the organism (tip to opposite tip).
  4. Complete the characteristics in data table 1.

Data:

Table 1

 

Characteristics of S. crassirostris
Wingspan (centimeters)?
Jaw Shape?
Teeth adapted for?
Arms & hands adapted for?
Number of bones in lower arm?
Number of bones making up skull?
Number of fingers?
Finger adaptations?

 

Questions:

  1. The bones of the lower arm and lower leg are fused (joined together). How might this be an adaptation for flight?
  2. What would be the main function of the long bones of S. crassirostris little finger?
  3. Noting the shape of the teeth and where S. crassirostris lived, what did it probably eat?
  4. Name 3 characteristics that adapted S. crassirostris to flight.
  5. The bones of S. crassirostris were hollow. How was this an adaptation?
  6. The flap of skin that made up the wing of S. crassirostris was very delicate and could tear easily. How could this cause a problem with S. crassirostris competing with other gliding reptiles?

 

 

Protist Unrevised Notes B1

 

 

Algae and Fungal-like Protists

 

Characteristics:

  •  Algae are autotrophic protists that have chloroplasts and produce their own carbohydrates by photosynthesis
  • In the past, algae was classified in the plant Kingdom, however, algae lack tissue differentiation and have no true roots, stems, or leaves
  • The reproductive structures of algae also differ from those of plants, because they form gametes in single-celled gametangia, or gamete chambers
  • Often times, algal cells contain pyrenoids, organelles that synthesize and store starch.

Structure:

  • The body portion of an alga is called a thallus; the thallus is usually haploid
  • Four types of algae are recognized: unicellular, colonial, filamentous, and multicellular
    ·        Unicellular algae have a structure that consists of a single cell; most unicellular algae are aquatic organisms that compose the phytoplankton, a population of photosynthetic organisms that forms the foundation of aquatic food chains.
    ·        Colonial algae, such as Volvox, have a structure that consists of groups of cells acting in a coordinated manner.
    ·        Some of the cells in colonial algae become specialized; this allows them to move, feed, and reproduce efficiently.
    ·        Filamentous algae, such as Spirogyra, have a slender, rod-shaped thallus composed of rows of cells joined end to end; other species of filamentous algae have specialized structures that anchor the thallus to the ocean bottom.
    ·        Multinuclear algae often have a large, complex thallus; Macrocystis is among the largest multicellular algae.

Classification
·        Algae are classified into 7 phyla, based on color, type of chlorophyll, form of food-storage substance, and cell wall composition.

Reproduction
·        Many species of algae reproduce sexually and asexually
·    Sexual reproduction in algae is often triggered by environmental stress
·        During asexual reproduction, the algae first absorbs its flagellum, then the haploid cell divides mitotically up to three times, and from two to eight haploid flagellated cells called zoospores develop within the parent cell, lastly, the asexual reproductive cells break out of the parent cell, disperse, and eventually grow to full size.
·        Sexual reproduction begins by haploid cells dividing mitotically to produce either “plus” or “minus” gametes.
·        A plus gamete and a minus gamete come into contact with one another and shed their cell walls, then they fuse and form a diploid zygote, which develops a thick protective wall; this resting stage of a zygote is called a zygospore.
·        A zygospore can withstand bad environmental conditions; during the bad environmental condition, the thick wall opens and the living zoospore emerges.

Reproduction in Multicellular Algae
·        The male unicellular gametangium, called an antheridium, produces sperm and the female unicellular gametangium, called an oogonium, produces an egg.
·        The antheridium releases sperm into the surrounding water, where they swim to the female egg and enter through small spores.
·        After fertilization, the resulting zygote is released from the female egg and forms a thick-walled, resting spore; the diploid undergoes meiosis, forming zoospores that are released into the water; the zoospore settles and divides to form a rootlike holdfast, and the others divide and form a new filament.
·        The leaflike algae Ulva has a sexual reproductive cycle that is characterized by a pattern called alternation of generations; a life cycle that exhibits alternation of generations has two distinct multicellular phases- a haploid, gamete-producing phase called a gametophyte and a diploid, spore-producing phase called a sporophyte.
·        The adult sporophyte has reproductive cells called sporangia, which produce haploid zoospore by meiosis.

Algal-Like Protists

Phylum Chlorophyta
·        The phylum Chlorophyta contains more than 7,000 identified species of organisms called green algae and members of this phylum have an amazing number of forms and reproductive methods and their body structures range from single cells and colonial forms to multicellular filaments and sheets.

Phylum Phaeophyta
·        The phylum Phaeophyta contains 1,500 species of organisms called brown algae; brown algae is mostly marine and plantlike organisms called seaweed’s and kelps, they are common along rocky coasts where ocean water is cool.
·        The brown algae contain chlorophylls a and c and a large amount of pigment called fucoxanthin, which give the algae its brown color.
·        The food brown algae produces are stored as laminarin, a carbohydrate with glucose units that are linked differently than those in starch.
·        All brown algae are multicellular; the largest brown alga is the Macrocystis.
·        The thallus is anchored to the ocean bottom by a rootlike holdfast; the stemlike portion of the alga is called the stipe and the leaflike region, modified to capture sunlight for photosynthesis is called the blade.
·        The cell walls of the Macrocystis contain alginate, an alginic acid that is used in cosmetics and various drugs, as food, and as a stabilizer in most ice creams.

Phylum Rhodophyta
·        The phylum Rhodophyta contains 4,000 species of organisms called red algae.
·        Red algae contain chlorophyll a and pigments called phycobilins, which play an important role in absorbing light for photosynthesis.
·        Phycobilins can absorb the wavelengths of light that penetrate deep into the water; they make it possible for red algae to live in depths where alga pigments cannot survive.
·        Certain species of red algae have cell walls that are coated with a sticky substance called carageenan, which is a polysaccharide.
·        Agar, which is used as a gel-forming base for culturing microbes, is also extracted from the cell wall of red algae.

Bacillariophyta
·        The phylum Bacillariophyta contains 11,500 species of organisms called diatoms.
·        Diatoms are abundant in both freshwater and marine environments; the cell wall, called shells, of the diatoms contains two pieces that fit together like a box; each half is called a valve.
·        Centric diatoms have circular or triangular shells and are most abundant in marine environments.
·        Pennate diatoms have rectangular shells and are most abundant in freshwater ponds and lakes; some pennate diatoms by secreting threads that attach to the surface of the water.
·        Diatoms are an abundant component of phytoplankton and are important producers in freshwater and marine food webs, along with being an essential source of nutrients for microscopic heterotrophs, and they release an abundance of oxygen.
·        When diatoms die their shells sink and accumulate in large numbers, forming a layer of material called diatomaceous earth.

Phylum Dinoflagellata
·      The phylum Dinoflagellata contains 1,100 species of organisms called dinoflagellates.
·        Dinoflagellates are small, usually unicellular organisms, photosynthetic, but a few are colorless and heterotrophic, and they are the major producers of organic matter in marine environments.
·      Photosynthetic dinoflagellates usually have a yellowish green to brown color due to large amounts of pigments called carotenoids and chlorophylls a and c.
·      Some species of dinoflagellates, such as Noctiluca, can produce bioluminescence, a display of sparkling light often seen in the ocean water at night.
·      When other species produce toxins and red pigments that explode, a resulting phenomenon is the red tide.

Phylum Chrysophyta
·        The phylum Chrysophyta contains about 850 species of organisms called golden algae, which live in freshwater, but few are found in marine environments.
·        Most of the species placed in this phylum are some shade of yellow or brown due to the presence of large amounts of carotenoids.
·        Golden algae store much of their surplus energy as oil and are important in the formation of petroleum deposits.

Phylum Euglenophyta
·        The phylum Euglenophyta contains 1,000 species of flagellated unicellular algae called euglenoids.
·        Euglenoids show both plantlike and animal-like characteristics; they are plantlike in that they have chlorophyll and are photosynthetic and they are animal-like in that they lack a cell wall and are highly motile.
·        Euglena is abundant in freshwater, especially in water polluted by excess nutrients.
·        Euglena lacks a cell wall and therefore is able to change its shape as it swims about.

Fungal-like Protists

Slime Molds
·        Slime molds spend half their life in a mobile, amoeba-like feeding form, engulfing organic matter and bacteria, like protozoa.
·        Slime molds produce funguslike reproductive structures, which is why they were once classified as fungi.
·        Slime molds are typically found growing on damp soil, rotting logs, decaying leaves, or other decomposing organic matter in moist areas.
·        During reproduction, slime molds produce a spore-bearing structure called a fruiting body.

Phylum Acrasiomycota
·        The phylum Acrasiomycota comprises about 65 species of cellular slime molds.
·        Cellular slime molds live as individual haploid cells that move about like amoebas; each cell moves as an independent organism, creeping over rotting logs and soil or swimming in fresh water, ingesting bacteria and other food.
·        A pseudoplasmodium is a coordinated colony of individual cells that resembles a slug, and it leaves a slimy trail as it crawls over decaying logs, leaves, and twigs.
·        Eventually a pseudoplasmodium will settle and form a fruiting body where spore will develop, then once the fruiting body breaks open, and the wind disperses the spores to new locations.

Phylum Myxomycota
·        450 species of plasmodial slime molds compose the phylum Myxomycota.
·        During the feeding stage of its life cycle, a plasmodial slime mold is a mass of cytoplasm called a plasmodium, and it may be as large as several square meters.
·        Each plasmodium is multinucleate or it contains thousands of nuclei.
·        The spores of a plasmodium are resistant to adverse conditions; in favorable conditions, they crack open and give rise to haploid reproductive cells.

Water Molds
·        A water mold is a funguslike organism composed of branched filaments of cells.
·        Water molds are aquatic and are commonly found in bodies of freshwater.

Phylum Oomycota
·        The phylum Oomycota includes a number of organisms that are pathogenic to plants.
·        Blight is a disease of plants characterized by quickly developing decay and discoloring leaves, stems, and flowers.
·        Water molds reproduce asexually and sexually.
·        During asexual reproduction, they produce motile, flagellated reproductive zoospores, which accumulate to form a matlike mass.
·        During sexual reproduction, the cells of the water mold develops egg-containing and sperm-containing structures, then tubes grow between the two types of structures letting the sperm cells to fertilize haploid egg cells to form diploid zygotes.

Phylum Chytridiomycota
·        It is approximately 750 protists species in the phylum Chytridiomycota.
·        The chytrids are primarily aquatic protists characterized by gametes and zoospores with a single, posterior flagellum.

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Properties of Water

 

Properties of Water

 

Introduction:

Water’s chemical description is H2O. As the diagram to the left shows, that is one atom of oxygen bound to two atoms of hydrogen. The hydrogen atoms are “attached” to one side of the oxygen atom, resulting in a water molecule having a positive charge on the side where the hydrogen atoms are and a negative charge on the other side, where the oxygen atom is. This uneven distribution of charge is called polarity. Since opposite electrical charges attract, water molecules tend to attract each other, making water kind of “sticky.” As the right-side diagram shows, the side with the hydrogen atoms (positive charge) attracts the oxygen side (negative charge) of a different water molecule. (If the water molecule here looks familiar, remember that everyone’s favorite mouse is mostly water, too). This property of water is known as cohesion.

All these water molecules attracting each other mean they tend to clump together. This is why water drops are, in fact, drops! If it wasn’t for some of Earth’s forces, such as gravity, a drop of water would be ball shaped — a perfect sphere. Even if it doesn’t form a perfect sphere on Earth, we should be happy water is sticky. Water is called the “universal solvent” because it dissolves more substances than any other liquid. This means that wherever water goes, either through the ground or through our bodies, it takes along valuable chemicals, minerals, and nutrients.

Water, the liquid commonly used for cleaning, has a property called surface tension. In the body of the water, each molecule is surrounded and attracted by other water molecules. However, at the surface, those molecules are surrounded by other water molecules only on the water side. A tension is created as the water molecules at the surface are pulled into the body of the water. This tension causes water to bead up on surfaces (glass, fabric), which slows wetting of the surface and inhibits the cleaning process. You can see surface tension at work by placing a drop of water onto a counter top. The drop will hold its shape and will not spread.

In the cleaning process, surface tension must be reduced so water can spread and wet surfaces. Chemicals that are able to do this effectively are called surface active agents, or surfactants. They are said to make water “wetter.” Surfactants perform other important functions in cleaning, such as loosening, emulsifying (dispersing in water) and holding soil in suspension until it can be rinsed away. Surfactants can also provide alkalinity, which is useful in removing acidic soils.

Pre-Lab Questions (Click here)

Materials:

Box of small paper clips, small plastic container, eyedropper, cup, stirring rod, water, liquid soap, plastic tray

Procedure (Part A) Cohesiveness of Water:

  1. Estimate how many paper clips will fit into a completely full cup of water. Record this number in data table 1.
  2. Place your small container on a tray to contain any water that may spill.
  3. Fill a plastic cup with tap water.
  4. Pour tap water from your cup into your small container.
  5. Continue to add water by eyedropper until the top surface appears rounded.
  6. Slowly add paper clips one at a time to the cup keeping count of all paper clips that you add.
  7. Stop adding paper clips to the container whenever water spills from the top.
  8. Record your paper clip count. Compare the actual number of paper clips to the estimated number.

Procedure (Part B) Soap’s effect on Surface Tension:

  1. Again estimate how many paper clips will fit into a completely full cup of soapy water. Record this number in data table 2.
  2. Place your small container on a tray to contain any water that may spill.
  3. Fill a plastic cup with tap water.
  4. Add several drops of liquid soap & use a stirring rod to mix.
  5. Pour soapy water from your cup into your small container.
  6. Continue to add soapy water by eyedropper until the top surface appears rounded.
  7. Slowly add paper clips one at a time to the cup keeping count of all paper clips that you add.
  8. Stop adding paper clips to the container whenever water spills from the top.
  9. Record your paper clip count. Compare the actual number of paper clips to the estimated number.

Data:

Table 1

 

Cohesiveness of Tapwater
Estimated Number of Paper Clips Actual Number of paper Clips Difference
 

 

 

Table 2

 

Cohesiveness of Soapy water
Estimated Number of Paper Clips Actual Number of paper Clips Difference
 

 

 

Questions: 

1. How did your estimated number compare to your actual number?

2. What happened to the surface of the water as more clips were added?

 

3. What property of water was shown in Part A?

4. How is this property of water used in nature?

5. Explain why water shows surface tension.

 

6. Explain why water is a polar molecule and include a diagram of several water molecules in a drop of water.

 

 

7. In order to clean a surface, what must happen to surface tension?

 

8. What is the job of a surfactant?

 

9. Name a surfactant used in Part B?

10. Using your data from Part B, explain what proof you gathered in Part B to support your answer to question 9.