Gastric Bacteria

 

The Nobel Prize in Physiology or Medicine for 2005

jointly to

Barry J. Marshall and J. Robin Warren

for their discovery of

“the bacterium Helicobacter pylori and its role in gastritis and peptic ulcer disease”

 

 Introduction

This year’s Nobel Laureates in Physiology or Medicine made the remarkable and unexpected discovery that inflammation in the stomach (gastritis) as well as ulceration of the stomach or duodenum (peptic ulcer disease) is the result of an infection of the stomach caused by the bacterium Helicobacter pylori.

Robin Warren (born 1937), a pathologist from Perth, Australia, observed small curved bacteria colonizing the lower part of the stomach (antrum) in about 50% of patients from which biopsies had been taken. He made the crucial observation that signs of inflammation were always present in the gastric mucosa close to where the bacteria were seen.

Barry Marshall (born 1951), a young clinical fellow, became interested in Warren’s findings and together they initiated a study of biopsies from 100 patients. After several attempts, Marshall succeeded in cultivating a hitherto unknown bacterial species (later denoted Helicobacter pylori) from several of these biopsies. Together they found that the organism was present in almost all patients with gastric inflammation, duodenal ulcer or gastric ulcer. Based on these results, they proposed that Helicobacter pylori is involved in the aetiology of these diseases.

Even though peptic ulcers could be healed by inhibiting gastric acid production, they frequently relapsed, since bacteria and chronic inflammation of the stomach remained. In treatment studies, Marshall and Warren as well as others showed that patients could be cured from their peptic ulcer disease only when the bacteria were eradicated from the stomach. Thanks to the pioneering discovery by Marshall and Warren, peptic ulcer disease is no longer a chronic, frequently disabling condition, but a disease that can be cured by a short regimen of antibiotics and acid secretion inhibitors.

Peptic ulcer – an infectious disease!

This year’s Nobel Prize in Physiology or Medicine goes to Barry Marshall and Robin Warren, who with tenacity and a prepared mind challenged prevailing dogmas. By using technologies generally available (fibre endoscopy, silver staining of histological sections and culture techniques for microaerophilic bacteria), they made an irrefutable case that the bacterium Helicobacter pylori is causing disease. By culturing the bacteria they made them amenable to scientific study.

In 1982, when this bacterium was discovered by Marshall and Warren, stress and lifestyle were considered the major causes of peptic ulcer disease. It is now firmly established that Helicobacter pylori causes more than 90% of duodenal ulcers and up to 80% of gastric ulcers. The link between Helicobacter pylori infection and subsequent gastritis and peptic ulcer disease has been established through studies of human volunteers, antibiotic treatment studies and epidemiological studies.

Helicobacter pylori causes life-long infection

Helicobacter pylori is a spiral-shaped Gram-negative bacterium that colonizes the stomach in about 50% of all humans. In countries with high socio-economic standards infection is considerably less common than in developing countries where virtually everyone may be infected.

Infection is typically contracted in early childhood, frequently by transmission from mother to child, and the bacteria may remain in the stomach for the rest of the person’s life. This chronic infection is initiated in the lower part of the stomach (antrum). As first reported by Robin Warren, the presence of Helicobacter pylori is always associated with an inflammation of the underlying gastric mucosa as evidenced by an infiltration of inflammatory cells.

The infection is usually asymptomatic but can cause peptic ulcer!

The severity of this inflammation and its location in the stomach is of crucial importance for the diseases that can result from Helicobacter pylori infection. In most individuals Helicobacter pylori infection is asymptomatic. However, about 10-15% of infected individuals will some time experience peptic ulcer disease. Such ulcers are more common in the duodenum than in the stomach itself. Severe complications include bleeding and perforation.

The current view is that the chronic inflammation in the distal part of the stomach caused by Helicobacter pylori infection results in an increased acid production from the non-infected upper corpus region of the stomach. This will predispose for ulcer development in the more vulnerable duodenum.

Malignancies associated with Helicobacter pylori infection

In some individuals Helicobacter pylori also infects the corpus region of the stomach. This results in a more widespread inflammation that predisposes not only to ulcer in the corpus region, but also to stomach cancer. This cancer has decreased in incidence in many countries during the last half-century but still ranks as number two in the world in terms of cancer deaths.

Inflammation in the stomach mucosa is also a risk factor for a special type of lymphatic neoplasm in the stomach, MALT (mucosa associated lymphoid tissue) lymphoma. Since such lymphomas may regress when Helicobacter pylori is eradicated by antibiotics, the bacterium plays an important role in perpetuating this tumour.

 Disease or not – interaction between the bacterium and the human host

Helicobacter pylori is present only in humans and has adapted to the stomach environment. Only a minority of infected individuals develop stomach disease. After Marshall’s and Warren’s discovery, research has been intense. Details underlying the exact pathogenetic mechanisms are continuously being unravelled.

The bacterium itself is extremely variable, and strains differ markedly in many aspects, such as adherence to the gastric mucosa and ability to provoke inflammation. Even in a single infected individual all bacteria are not identical, and during the course of chronic infection bacteria adapt to the changing conditions in the stomach with time.

Likewise, genetic variations among humans may affect their susceptibility to Helicobacter pylori. Not until recently has an animal model been established, the Mongolian gerbil. In this animal, studies of peptic ulcer disease and malignant transformation promise to give more detailed information on disease mechanisms.

Antibiotics cure but can lead to resistance

Helicobacter pylori infection can be diagnosed by antibody tests, by identifying the organism in biopsies taken during endoscopy, or by the non-invasive breath test that identifies bacterial production of an enzyme in the stomach.

An indiscriminate use of antibiotics to eradicate Helicobacter pylori also from healthy carriers would lead to severe problems with bacterial resistance against these important drugs. Therefore, treatment against Helicobacter pylori should be used restrictively in patients without documented gastric or duodenal ulcer disease.

Microbial origin of other chronic inflammatory conditions?

Many diseases in humans such as Crohn’s disease, ulcerative colitis, rheumatoid arthritis and atherosclerosis are due to chronic inflammation. The discovery that one of the most common diseases of mankind, peptic ulcer disease, has a microbial cause, has stimulated the search for microbes as possible causes of other chronic inflammatory conditions.

Even though no definite answers are at hand, recent data clearly suggest that a dysfunction in the recognition of microbial products by the human immune system can result in disease development. The discovery of Helicobacter pylori has led to an increased understanding of the connection between chronic infection, inflammation and cancer.

Source: http://nobelprize.org/nobel_prizes/medicine/laureates/2005/press.html

 

Fungi Study Guide B1

Fungi Study Guide

 

Know the following:

 

  • general characteristics of all fungi
  • how fungi get their nutrients
  • what makes up the cell walls of fungi
  • are fungi heterotrophic or autotrophic & why
  • can fungi carry on photosynthesis
  • how fungi growing on the roots of plants help them
  • what causes ringworm
  • what are sporangia
  • know the parts of a mushroom & which parts acquire food for the organism
  • how fungi obtain their energy
  • where fungi digest their organic matter
  • what is a hyphae
  • What mats of hypha are called
  • steps in the life cycle of a mold
  • what part of a mold releases enzymes & absorbs digested food
  • what must happen for sexual reproduction to occur between mold hypha
  • examples of club fungi
  • phylum for mushrooms
  • characteristics of sac fungi or ascomycetes
  • what type of spores allow molds to remain dormant during harsh conditions
  • most common member of the zygomycete group
  • what are sporangia & what forms inside them
  • what is an example of a unicellular fungus
  • how do yeasts asexually reproduce
  • what 2 things make up the body of a lichen
  • why are fungi so important to the environment

Genetics Worksheet Bi Chapter 9

 Fundamentals of Genetics

Section 9-1 Mendel’s Legacy

1. What scientist is responsible for our study of heredity?

2. Define heredity.

3. What plant did Mendel use for his hereditary experiments?

4. Name the 7 characteristics, giving both dominant and recessive forms of the pea plants, in Mendel’s experiments.

5. In order to study pea plant traits, Mendel had to control __________________ among the plants.

6. Define pollination & name 2 types.

7. How do pea plants normally pollinate?

8. How can cross-pollination of pea plants be done?

9. How did Mendel obtain pure pea plants?

10. What is the P1 generation? How is it obtained?

11. What is the F1 generation &how is it obtained?

12. How did Mendel obtain his F2 generation?

13. When Mendel crossed his P1 plants to get the F1 generation, what ratio did he get?

14. What is the difference between dominant & recessive genes?

15. State Mendel’s law of segregation.

16. What are alleles?

Section 9-2 Genetic Crosses

17 What is the difference between genotypes & phenotypes?

18. Write the 2 genotypes for a purple flower.

19. Write the genotype for a white flower.

20. What is the difference in a homozygous and a heterozygous genotype?

21. What is  probability & tell 3 ways they can be expressed.

22. What is the probability that you will get “heads” each time you flip a coin?

23. What is a monohybrid cross?

24. Give an example of a monohybrid cross.

25. What is a Punnett Square used for?

26. Sketch the Punnett Square for crossing a pure purple flower with a white flower.

27. Use a Punnett Square to solve this cross — PP x pp.

28. What percentage of the offspring from this cross are purple? White?

29. Use a Punnett Square to solve this cross in guinea pigs — BB x Bb. Hint: See page 174.

30. In the above cross, what coat colors & percents did you get?

31. What phenotype (coat color) would each of these guinea pig genotypes result in:

        a. Bb?

        b. BB?

        c. bb?

32. Use a Punnett Square to solve this cross for coat color in rabbits: Bb x Bb?

33. What percent of the rabbits will have black fur? Brown fur? What ratio does this give for coat color?

34. Define genotypic ratio.

35. What is the genotypic ratio for all F1 crosses (bb x Bb)?

36. Define phenotypic ratio.

37. What is the phenotypic ratio for all F1 crosses?

38. What is a testcross?

39. A testcross can determine which individual’s phenotype is ________________________.

40. Use a Punnett Square to solve the following 2 testcrosses:

        a. BB x Bb

        b. bb x Bb

41. In each of the above testcrosses, tell how many offspring have black coats (dominant) and how many will have brown (recessive) coats?

42. What does complete dominance mean?

43. Give an example of complete dominance in pea plants.

44. What is incomplete dominance?

45. How many alleles influence the phenotype in:

        a. complete dominance?

        b. incomplete dominance?

46. Using four-o-clocks, give an example of how incomplete dominance occurs. Be sure to tell all possible genotypes & phenotypes.

47. Give the following ratios for crossing 2 pink four-o-clocks (Rr x Rr):

        a. Genotypic ratio?

        b. Phenotypic ratio?

48. Define codominance.

49. In what genotype does codominance appear?

50. In horses, _________________ coat color is a result of codominance.

51. Write the genotype for roan coat color & tell the color of each allele in the genotype.

52. What is a dihybrid cross?

53. How many different genotypes will result in a dihybrid cross when 2 homozygous organisms are crossed?

54. The offspring from a dihybrid cross of 2 homozygous organisms will all be __________________________.

55. Use a Punnett Square to show the results of the following cross: RrYy x RrYy

56. How many different genotypes resulted from this cross?

57. How many different phenotypes resulted from this cross?

58. Write the genotypes for each of these phenotypes:

        a. Round, green seeds

        b. Wrinkled, yellow seeds

        c. Wrinkled, green seeds